Package: digitalPCR 1.1.0

digitalPCR: Estimate Copy Number for Digital PCR

The assay sensitivity is the minimum number of copies that the digital PCR assay can detect. Users provide serial dilution results in the format of counts of positive and total reaction wells. The output is the estimated assay sensitivity and the copy number per well in the initial dilute.

Authors:Xutao Deng

digitalPCR_1.1.0.tar.gz
digitalPCR_1.1.0.zip(r-4.7)digitalPCR_1.1.0.zip(r-4.6)digitalPCR_1.1.0.zip(r-4.5)
digitalPCR_1.1.0.tgz(r-4.6-any)digitalPCR_1.1.0.tgz(r-4.5-any)
digitalPCR_1.1.0.tar.gz(r-4.7-any)digitalPCR_1.1.0.tar.gz(r-4.6-any)
digitalPCR_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
digitalPCR/json (API)

# Install 'digitalPCR' in R:
install.packages('digitalPCR', repos = c('https://xutaodeng.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 scripts 173 downloads 6 exports 0 dependencies

Last updated from:3aa1567200. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK97
source / vignettesOK145
linux-release-x86_64OK104
macos-release-arm64OK179
macos-oldrel-arm64OK209
windows-develOK102
windows-releaseOK55
windows-oldrelOK54
wasm-releaseOK78

Exports:bootstrappingdigitalPCRlikelihoodmaximum.likelihoodpoisson.paramTL

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Estimate copy number and assay sensitivity from dPCR serial dilutiondigitalPCR
Internal functionsbootstrapping digitalPCR-internal likelihood maximum.likelihood poisson.param TL