Package: digitalPCR 1.1.0
digitalPCR: Estimate Copy Number for Digital PCR
The assay sensitivity is the minimum number of copies that the digital PCR assay can detect. Users provide serial dilution results in the format of counts of positive and total reaction wells. The output is the estimated assay sensitivity and the copy number per well in the initial dilute.
Authors:
digitalPCR_1.1.0.tar.gz
digitalPCR_1.1.0.zip(r-4.5)digitalPCR_1.1.0.zip(r-4.4)digitalPCR_1.1.0.zip(r-4.3)
digitalPCR_1.1.0.tgz(r-4.4-any)digitalPCR_1.1.0.tgz(r-4.3-any)
digitalPCR_1.1.0.tar.gz(r-4.5-noble)digitalPCR_1.1.0.tar.gz(r-4.4-noble)
digitalPCR_1.1.0.tgz(r-4.4-emscripten)digitalPCR_1.1.0.tgz(r-4.3-emscripten)
digitalPCR.pdf |digitalPCR.html✨
digitalPCR/json (API)
| # Install 'digitalPCR' in R: |
| install.packages('digitalPCR', repos = c('https://xutaodeng.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 years agofrom:3aa1567200. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 15 2024 |
| R-4.5-win | OK | Oct 15 2024 |
| R-4.5-linux | OK | Oct 15 2024 |
| R-4.4-win | OK | Oct 15 2024 |
| R-4.4-mac | OK | Oct 15 2024 |
| R-4.3-win | OK | Oct 15 2024 |
| R-4.3-mac | OK | Oct 15 2024 |
Exports:bootstrappingdigitalPCRlikelihoodmaximum.likelihoodpoisson.paramTL
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Estimate copy number and assay sensitivity from dPCR serial dilution | digitalPCR |
| Internal functions | bootstrapping digitalPCR-internal likelihood maximum.likelihood poisson.param TL |
