Package: digitalPCR 1.1.0

digitalPCR: Estimate Copy Number for Digital PCR

The assay sensitivity is the minimum number of copies that the digital PCR assay can detect. Users provide serial dilution results in the format of counts of positive and total reaction wells. The output is the estimated assay sensitivity and the copy number per well in the initial dilute.

Authors:Xutao Deng

digitalPCR_1.1.0.tar.gz
digitalPCR_1.1.0.zip(r-4.7-any)digitalPCR_1.1.0.zip(r-4.6-any)digitalPCR_1.1.0.zip(r-4.5-any)
digitalPCR_1.1.0.tgz(r-4.6-any)digitalPCR_1.1.0.tgz(r-4.5-any)
digitalPCR_1.1.0.tar.gz(r-4.7-any)digitalPCR_1.1.0.tar.gz(r-4.6-any)
digitalPCR_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
digitalPCR/json (API)

# Install 'digitalPCR' in R:
install.packages('digitalPCR', repos = c('https://xutaodeng.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 scripts 250 downloads 6 exports 0 dependencies

Last updated from:3aa1567200. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK81
source / vignettesOK138
linux-releaseOK85
macos-releaseOK158
macos-oldrelOK198
windows-develOK47
windows-releaseOK51
windows-oldrelOK46
wasm-releaseOK68

Exports:bootstrappingdigitalPCRlikelihoodmaximum.likelihoodpoisson.paramTL

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Estimate copy number and assay sensitivity from dPCR serial dilutiondigitalPCR
Internal functionsbootstrapping digitalPCR-internal likelihood maximum.likelihood poisson.param TL