Package: digitalPCR 1.1.0

digitalPCR: Estimate Copy Number for Digital PCR

The assay sensitivity is the minimum number of copies that the digital PCR assay can detect. Users provide serial dilution results in the format of counts of positive and total reaction wells. The output is the estimated assay sensitivity and the copy number per well in the initial dilute.

Authors:Xutao Deng

digitalPCR_1.1.0.tar.gz
digitalPCR_1.1.0.zip(r-4.5)digitalPCR_1.1.0.zip(r-4.4)digitalPCR_1.1.0.zip(r-4.3)
digitalPCR_1.1.0.tgz(r-4.4-any)digitalPCR_1.1.0.tgz(r-4.3-any)
digitalPCR_1.1.0.tar.gz(r-4.5-noble)digitalPCR_1.1.0.tar.gz(r-4.4-noble)
digitalPCR_1.1.0.tgz(r-4.4-emscripten)digitalPCR_1.1.0.tgz(r-4.3-emscripten)
digitalPCR.pdf |digitalPCR.html
digitalPCR/json (API)

# Install 'digitalPCR' in R:
install.packages('digitalPCR', repos = c('https://xutaodeng.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 scripts 165 downloads 6 exports 0 dependencies

Last updated 9 years agofrom:3aa1567200. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 14 2024
R-4.5-winOKNov 14 2024
R-4.5-linuxOKNov 14 2024
R-4.4-winOKNov 14 2024
R-4.4-macOKNov 14 2024
R-4.3-winOKNov 14 2024
R-4.3-macOKNov 14 2024

Exports:bootstrappingdigitalPCRlikelihoodmaximum.likelihoodpoisson.paramTL

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Estimate copy number and assay sensitivity from dPCR serial dilutiondigitalPCR
Internal functionsbootstrapping digitalPCR-internal likelihood maximum.likelihood poisson.param TL